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Online Journal of Bioinformatics©

Onl J Bioinform©


Established 1995

ISSN  1443-2250

 

Volume 26 (2) : 70-76, 2025


Intron-2 variability of leptin gene in buffalo.

 

Srikala R, Ravikumar G, Narang R, Satyendra PS, Amrita C, Rajni G.

 

Molecular Cytogenetics Lab, Department of Animal Breeding and Genetics,  Ludhiana, India.

 

ABSTRACT

 

A study on leptin gene was conducted to detect the variability at nucleotide level in reverine buffaloes. The PCR-RFLP of 423 bp amplicon of leptin gene with Hph I, Sau 3A I and Alu I revealed monomorphism at these loci in Mehsana, Surti and Nili-Ravi breeds of buffaloes. However on sequencing the amplicon in these breeds variability at nucleotide positions 43, 47, 51, 70, 71, 76, 89, 94, 99, 150, 194, 213, 267, 315, 335,411 and 415 was identified. The comparison between buffalo sequences and other species revealed changes of nucleotides at several positions. The sequences were submitted in the NCBI gene bank with accession numbers: DQ497641, DQ831142 and DQ831143. On phylogenetic analysis of nucleic acid sequences all the buffalo leptin sequences clustered into a monophyletic group. The bovids clustered clearly from Capra hircus and Ovis aries cluster.

 

Key words : Sequence, polymorphism, Bubalus bubalis, Leptin.


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