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OJBTM
Online Journal of
Bioinformatics©
Volume
22 (2): 82-95, 2021.
BTDB
- Database on structural and functional Information for biotoxins
Gowrishankar R and SundaraBaalaji N.
Structural
Biology lab, Department of Bioinformatics, School of life sciences, Bharathiar University, Coimbatore – 641 046.
ABSTRACT
Gowrishankar R, SundaraBaalaji
N., Database on structural and functional
Information for biotoxins, Onl
J Bioinform., 22 (2): 82-95, 2021. Databases
containing structural information have become indispensable for in silico
structural analysis. Toxin data provide sequences, but limited structural descriptions and
functional annotations. As the gap between the amount of structural information
and functional characterization widens, increasing efforts are being directed
to the development of databases. Biotoxic proteins can
identify the membrane proteins, ion channels and predict cancer cell surfaces. We
modeled snake, spider and scorpion biotoxins primary
sequence databases. We determined 3D toxin protein structure by homology
modeling and validation by computation for features and putative function. To
access model proteins we created a database for biotoxin
cancer research, drug design, membrane proteins and ion channels.
Keywords: Biotoxin, Polypeptide, Homology modeling, RMSD, Minimized energy, Database, HTML, MySQL.
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